Protein ZmOrphan120 | |
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Information | |
Orphans Name: | ZmOrphan120 |
Species: | Maize |
Orphans Family: | Orphans |
Gene Name(Synonym): | |
Uniprot ID: | B6THK5 |
Subgenome: | 1 |
ZmOrphan120 is a protein in the Orphans family.
Overview of domains present in v5 transcripts | |
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PF00072 | |
Zm00001eb306330_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d019555 | DAPseq | sequence | fimo | position | |
Zm00001d019555 | DAPseq | sequence | fimo | position | |
Zm00001d019555 | ChIPseq | sequence | fimo | position | |
Zm00001d019555 | PChIPseq | sequence | fimo | position |
MEVAGACCHAGEERKVAVPIGNDAEVEPCVIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSEPNVSMIITDY
WMPEMTGYDLLKKVKQESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRITTRMLLH
MEVAGACCHAGEERKVAVPIGNDAEVEPCVIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSEPNVSMIITDY
WMPEMTGYDLLKKVKQESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRITTRMLLH
MEVAGACCHAGEERKVAVPIGNDAEVEPCVIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSEPNVSMIITDY
WMPEMTGYDLLKKVKQESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRITTRMLLH
MEVAGACCHAGEERKVAVPIGNDAEVEPCVIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSEPNVSMIITDY
WMPEMTGYDLLKKVKQESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRITTRMLLH
MEVAGACCHAGEERKVAVPIGNDAEVEPCVIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSEPNVSMIITDY
WMPEMTGYDLLKKVKQESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRITTRMLLH
Secondary Structure Color Code | |
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BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF00072 |
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Hover here to show all domains |
CACGAGGATCCTGCCTGCGGGACCC...
CACGAGGATCCTGCCTGCGGGACCCTCCACTTTGTTGGCATCGCAGCAAGCAGCGGCGCGGTACGGTCGCGTACGGGGACGGGAATACGGGATGCGATCCAATCGGAGTGTTCCAGTCCAGCGAGCGCACGGCCGCGCGACAAGCCTTGCTCGGCGCGGAGGAGGCAGGTGCCAACTGTGCGTGAATGAGGCACGATCTGACAGCCGCTGGACGTGAGATTTCCGGACAGGAGAACCGCGCTGCCACACCCCCCCGCACGGCCCCTGCGGCGCGATGCGCTATCCATCCATGGCCACGATCCGTCCGTGCCATGCCGATCCCGCCTGCGGCTCAGCAGCGACTCCACGGGCCACGGCCGCGGGGGGGATTCACCGCATCGCGATCTCCGATCCGATCCGATCCCGCCCGATCCTCGCGCCATCTTTTCTTTTTTTTTCTTCTTCTATAGTGTGTAGATAGTGTGCATATAAATATACCCACACTGTTCCTCCGGTGATTGCATCGTTGGCAGCGCCATTCATCCATTTGTCTTTTTGATTTGTTTTGACCTGAGGGCAAGGCAGGGCAGAACAGAGAGCATTCGTCTCGATCAACCAGATCTCGATCAATGGAGGTGGCGGGGGCTTGCTGCCACGCCGGCGAGGAGAGGAAGGTGGCTGTGCCTATCGGCAACGATGCGGAGGTGGAGCCATGCGTCATCGCCGTGGACGACAGCTCCGTCGACCGCGCCATCGTCACCGCGCTCCTCCGGCGCTCCAAGTACAGAGTCACTGCGGTTGACAGCGGGAAGAGGGCGCTGGAGATACTGGGCTCGGAGCCGAATGTGAGCATGATCATCACAGACTACTGGATGCCAGAGATGACCGGCTACGACCTGCTCAAAAAGGTCAAGCAGGAGTCTTCGAAGCTGAAGCGGATCCCAGTGGTGATCATGTCCTCAGAGAACGTGCCCACCAGAATCACCAGATGCCTTGAGGAAGGCGCGGAGGACTTCCTGCTGAAGCCGGTCAGGCCGTCCGACATCTCCCGCATAACAACCAGGATGCTGCTACACTGAACTTCTTTCACCAGTGGCCACCCAAGCCAGGCGTAGTGTTTTCAATTCAAGTCACAGTAGAGGTATAGGAACGGAGTCAATTTAGGGTAGCAATTAGCCGCAGGAAGTTTGATGTAATGTGGCCTTTCATTCATTAGTGCTTCGAGCTTTCTTTGGCGTCTTACTCGATCAAGAACAGGCAGGG
MEVAGACCHAGEERKVAVPIGNDAEVEPCVIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSEPNVSMIITDY
WMPEMTGYDLLKKVKESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRITTRMLLH
CACGAGGATCCTGCCTGCGGGACCC...
CACGAGGATCCTGCCTGCGGGACCCTCCACTTTGTTGGCATCGCAGCAAGCAGCGGCGCGGTACGGTCGCGTACGGGGACGGGAATACGGGATGCGATCCAATCGGAGTGTTCCAGTCCAGCGAGCGCACGGCCGCGCGACAAGCCTTGCTCGGCGCGGAGGAGGCAGGTGCCAACTGTGCGTGAATGAGGCACGATCTGACAGCCGCTGGACGTGAGATTTCCGGACAGGAGAACCGCGCTGCCACACCCCCCCGCACGGCCCCTGCGGCGCGATGCGCTATCCATCCATGGCCACGATCCGTCCGTGCCATGCCGATCCCGCCTGCGGCTCAGCAGCGACTCCACGGGCCACGGCCGCGGGGGGGATTCACCGCATCGCGATCTCCGATCCGATCCGATCCCGCCCGATCCTCGCGCCATCTTTTCTTTTTTTTTCTTCTTCTATAGTGTGTAGATAGTGTGCATATAAATATACCCACACTGTTCCTCCGGTGATTGCATCGTTGGCAGCGCCATTCATCCATTTGTCTTTTTGATTTGTTTTGACCTGAGGGCAAGGCAGGGCAGAACAGAGAGCATTCGTCTCGATCAACCAGATCTCGATCAATGGAGGTGGCGGGGGCTTGCTGCCACGCCGGCGAGGAGAGGAAGGTGGCTGTGCCTATCGGCAACGATGCGGAGGTGGAGCCATGCGTCATCGCCGTGGACGACAGCTCCGTCGACCGCGCCATCGTCACCGCGCTCCTCCGGCGCTCCAAGTACAGAGTCACTGCGGTTGACAGCGGGAAGAGGGCGCTGGAGATACTGGGCTCGGAGCCGAATGTGAGCATGATCATCACAGACTACTGGATGCCAGAGATGACCGGCTACGACCTGCTCAAAAAGGTCAAGGAGTCTTCGAAGCTGAAGCGGATCCCAGTGGTGATCATGTCCTCAGAGAACGTGCCCACCAGAATCACCAGATGCCTTGAGGAAGGCGCGGAGGACTTCCTGCTGAAGCCGGTCAGGCCGTCCGACATCTCCCGCATAACAACCAGGATGCTGCTACACTGAACTTCTTTCACCAGTGGCCACCCAAGCCAGGCGTAGTGTTTTCAATTCAAGTCACAGTAGAGGTATAGGAACGGAGTCAATTTAGGGTAGCAATTAGCCGCAGGAAGTTTGATGTAATGTGGCCTTTCATTCATTAGTGCTTCGAGCTTTCTTTGGCGTCTTACTCGATCAAGAACAGGCAGGGATTAGTTGTAGGGTTCCAGTTCCAGAAGTAGCGACTTTGTTGTCTTAAGTATAACGAATCGTGAAAGTGTAAATCACTGCACGAATCATTCTGTTAAAGAGGAACATTACAATTTACATTGGCTTAGCCGTTTTCTTTTTCAACTAA
MEVAGACCHAGEERKVAVPIGNDAEVEPCVIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSESSKLKRIPVV
IMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRITTRMLLH
CACGAGGATCCTGCCTGCGGGACCC...
CACGAGGATCCTGCCTGCGGGACCCTCCACTTTGTTGGCATCGCAGCAAGCAGCGGCGCGGTACGGTCGCGTACGGGGACGGGAATACGGGATGCGATCCAATCGGAGTGTTCCAGTCCAGCGAGCGCACGGCCGCGCGACAAGCCTTGCTCGGCGCGGAGGAGGCAGGTGCCAACTGTGCGTGAATGAGGCACGATCTGACAGCCGCTGGACGTGAGATTTCCGGACAGGAGAACCGCGCTGCCACACCCCCCCGCACGGCCCCTGCGGCGCGATGCGCTATCCATCCATGGCCACGATCCGTCCGTGCCATGCCGATCCCGCCTGCGGCTCAGCAGCGACTCCACGGGCCACGGCCGCGGGGGGGATTCACCGCATCGCGATCTCCGATCCGATCCGATCCCGCCCGATCCTCGCGCCATCTTTTCTTTTTTTTTCTTCTTCTATAGTGTGTAGATAGTGTGCATATAAATATACCCACACTGTTCCTCCGGTGATTGCATCGTTGGCAGCGCCATTCATCCATTTGTCTTTTTGATTTGTTTTGACCTGAGGGCAAGGCAGGGCAGAACAGAGAGCATTCGTCTCGATCAACCAGATCTCGATCAATGGAGGTGGCGGGGGCTTGCTGCCACGCCGGCGAGGAGAGGAAGGTGGCTGTGCCTATCGGCAACGATGCGGAGGTGGAGCCATGCGTCATCGCCGTGGACGACAGCTCCGTCGACCGCGCCATCGTCACCGCGCTCCTCCGGCGCTCCAAGTACAGAGTCACTGCGGTTGACAGCGGGAAGAGGGCGCTGGAGATACTGGGCTCGGAGTCTTCGAAGCTGAAGCGGATCCCAGTGGTGATCATGTCCTCAGAGAACGTGCCCACCAGAATCACCAGATGCCTTGAGGAAGGCGCGGAGGACTTCCTGCTGAAGCCGGTCAGGCCGTCCGACATCTCCCGCATAACAACCAGGATGCTGCTACACTGAACTTCTTTCACCAGTGGCCACCCAAGCCAGGCGTAGTGTTTTCAATTCAAGTCACAGTAGAGGTATAGGAACGGAGTCAATTTAGGGTAGCAATTAGCCGCAGGAAGTTTGATGTAATGTGGCCTTTCATTCATTAGTGCTTCGAGCTTTCTTTGGCGTCTTACTCGATCAAGAACAGGCAGGGATTAGTTGTAGGGTTCCAGTTCCAGAAGTAGCGACTTTGTTGTCTTAAGTATAACGAATCGTGAAAGTGTAAATCACTGCACGAATCATTCTGTTAAAGAGGAACATTACAATTTACATTGGCTTAGCCGTTTTCTTTTTCAACTAA
MEVAGACCHAGEERKVAVPIGNDAEVEPCVIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSEPNVSMIITDY
WMPEMTGYDLLKKVKESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRITTRMLLH
ATCGCAGCAAGCAGCGGCGCGGTAC...
ATCGCAGCAAGCAGCGGCGCGGTACGGTCGCGTACGGGGACGGGAATACGGGATGCGATCCAATCGGAGTGTTCCAGTCCAGCGAGCGCACGGCCGCGCGACAAGCCTTGCTCGGCGCGGAGGAGGCAGGTGCCAACTGTGCGTGAATGAGGCACGATCTGACAGCCGCTGGACGTGAGATTTCCGGACAGGAGAACCGCGCTGCCACACCCCCCCGCACGGCCCCTGCGGCGCGATGCGCTATCCATCCATGGCCACGATCCGTCCGTGCCATGCCGATCCCGCCTGCGGCTCAGCAGCGACTCCACGGGCCACGGCCGCGGGGGGGATTCACCGCATCGCGATCTCCGATCCGATCCGATCCCGCCCGATCCTCGCGCCATCTTTTCTTTTTTTTTCTTCTTCTATAGTGTGTAGATAGTGTGCATATAAATATACCCACACTGTTCCTCCGGTGATTGCATCGTTGGCAGCGCCATTCATCCATTTGTCTTTTTGATTTGTTTTGACCTGAGGGCAAGGCAGGGCAGAACAGAGAGCATTCGTCTCGATCAACCAGATCTCGATCAATGGAGGTGGCGGGGGCTTGCTGCCACGCCGGCGAGGAGAGGAAGGTGGCTGTGCCTATCGGCAACGATGCGGAGGTGGAGCCATGCGTCATCGCCGTGGACGACAGCTCCGTCGACCGCGCCATCGTCACCGCGCTCCTCCGGCGCTCCAAGTACAGAGTCACTGCGGTTGACAGCGGGAAGAGGGCGCTGGAGATACTGGGCTCGGAGCCGAATGTGAGCATGATCATCACAGACTACTGGATGCCAGAGATGACCGGCTACGACCTGCTCAAAAAGGTCAAGGAGTCTTCGAAGCTGAAGCGGATCCCAGTGGTGATCATGTCCTCAGAGAACGTGCCCACCAGAATCACCAGATGCCTTGAGGAAGGCGCGGAGGACTTCCTGCTGAAGCCGGTCAGGCCGTCCGACATCTCCCGCATAACAACCAGGATGCTGCTACACTGAACTTCTTTCACCAGTGGCCACCCAAGCCAGGCGTAGTGTTTTCAATTCAAGTCACAGTAGAGGTATAGGAACGGAGTCAATTTAGGGTAGCAATTAGCCGCAGGAAGTTTGATGTAATGTGGCCTTTCATTCATTAGTGCTTCGAGCTTTCTTTGGCGTCTTACTCGATCAAGAACAGGCAGGGATTAGTTGTAGGGTTCCAGTTCCAGAAGTAGCGACTTTGTTGTCTTAAGTATAACGAATCGTGAAAGTGTAAATCACTGCACGAATCATTCTGTTAAAGAGGAACATTACAATTTACATTG
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